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Info
titleStatus

in draft

Sommaire

What is

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VIVO-

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Studio?

UQAMVIVO-DEV Studio is an execution and development environment for VIVO.

 Requirements

All the tools necessary for VIVO development – such as Maven, GIT, code editor, ontology engineering and editing, etc. – are directly integrated into the Eclipse environment.

It is therefore not necessary to install those tools on your platforms, unless you want to use them outside of Eclipse.

1 Installing TopBraid Composer

This release (Rev 4) is based on the TopBraid Composer (TBC) software. TBC is an ontological engineering tool. It allows ontology editing, the aggregation of several ontologies and the representation of ontology content in a visual form. UQAM-DEV Rev.4 VIVO-Studio is based on the technology of this tool.

The installation of UQAMVIVO-DEV Studio starts with the download of TBC Free Edition which is available from this link:

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Download and install the right version for your operating system

2 Installing

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VIVO-

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Studio

You can continue the installation of UQAMVIVO-DEV Studio by following these steps:

(The demonstration is realized in the LINUX Ubuntu environment)


StepDescription

2.1 Unzip and launch TopBraid Composer

In your favorite directory (ex.: in my case C:\60-UQAM-DEV-Rev4), unzip 

/home/heon/VIVO-Project

 unzip the tbcfe package and click on the executable to launch the application.Image Removed




Bloc de code
languagebash
mkdir tbcfe
tar xzf tbcfe-6.0.1.v20180831-1223-linux.gtk.x86_64.tar.gz -C ./tbcfe
cd tbcfe/
./TopBraid\ Composer


By default, TopBraid will ask you to select a workspace. The actual location of that workspace has little importance. You can locate it wherever you want, choose to use it as default if desired, and proceed.

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Topbraid will then display a general information window. Dismiss it to get to main interface:

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2.2 Installing

UQAM

VIVO-

DEV

Studio with TopBraid Installing New Software

Under Help Menu, Select Install New Software


2.3 Adding Software Site

From the Available Software window, enter 

http://vivo-i18n.dev.uqam.ca:8080/uqamvivo-devstudio/rev410rev-500/

in the Work With Field and 'Select All' check box

Then click on the 'Next' button.

2.4 Complete the installation

Answer positively to all the questions and finalize the installation by clicking on Finish.

The following dialogue should appear and you just have to wait a little while until the process is complete.

You will be asked security questions, you must accept them by clicking on the OK button.

At the end of the installation, you will be offered to restart Eclipse. Click 'Yes'.


2.5 Complete the configuration

For this configuration step, Eclipse will restart twice. You will therefore see those two splash screens appear before you can access your workspace.

3 Testing the installation

Here are a few checks that will help ensure that UQAMVIVO-DEV Studio is correctly configured.

CheckDescription

3.1 Perspectives and projects

After the UQAMVIVO-DEV Studio has been installed:

  1. Click the Open Perspective icon
  2. Select Java

The list of projects should appear as shown in the second image.


3.2 Project Contents

Each project starting with a number contains a list of files needed to run VIVO. Make sure that the files that are part of your installation look like the figure shown here.

3.3 Setup External Tools

This step completes and validates the installation of the external tools that are ready to be configured in UQAMVIVO-DEVStudio.

  1. Scroll down the menu corresponding to the external tools button, and choose Organize Favorites...
  2. In the dialog box that will appear, click on Add..., then Select All, then OK and OK.
  3. By clicking the external tools button again you should see the list of shortcuts allowing you to perform the actions necessary to manage VIVO.

3.4 Setup Run Configurations

This step completes and validates the installation of the run tools that are ready to be configured in UQAMVIVO-DEVStudio.

In 1) scroll down the menu corresponding to the Run button, and choose Organize Favorites...

In 2) in the dialog box that will appear, click on 'Add', then 'Select All', then 'OK' and 'OK'.

In 3) by clicking the Run button again you should see the list of shortcuts allowing you to perform the actions necessary to compile VIVO.

1)

2)

3)

3.5 Validating Servers installation

With the file manager, access the directory containing Eclipse. Observe in this directory if the four servers are present as shown in the figure.

Conclusion

At the end of this procedure you should have a complete installation of the UQAMVIVO-DEVStudio. You can refer to the other documents in this wiki to learn how to compile and run a VIVO instance.

Appendix

NameURL
UQAMVIVO-DEV Rev 4 Studio  updateSitehttp://vivo-i18n.dev.uqam.ca:8080/uqam-dev/rev410/

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